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Category Archives: BioInformatics
Bioinformatics 101 – Running BLAST – Video
20-12-2010 17:38 How to format the database for BLAST, run the command, view the output file, and use BioPerl and Perl to parse the output. By David Francis, Ohio State University. Delivered live at the Tomato Disease Workshop 2010. Continue reading
Posted in BioInformatics
Tagged and-use, command, database, database-for, david, format-the, output-file, parse-the, parse-the-output, please-visit, state, tomato-disease, view-the, view-the-output, workshop-
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Signal Genetics to Buy ChipDx, Gaining Cancer Test Pipeline, Bioinformatics Resources
Full-text access for premium subscribers only. Continue reading
Posted in BioInformatics
Tagged becker-medical, digital, digital-world, kristi, sandra-porter, school, sciene, technology, tracy
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In Print: January's Bioinformatics Papers of note
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Posted in BioInformatics
Tagged access-for, becker, becker-medical, genome-technology, kristi, library, medicine, sandra-porter, technology
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Bioinformatics Startup Scale Genomics Touts Flexibility as Key Differentiator of Cloud Platform
Life Technologies this week named Alan Sachs as head of global research and development and Ronnie Andrews as president of medical sciences. Sachs was previously the vice president of exploratory and translational sciences for Merck Research Laboratories, where he spent 10 years in various leadership roles, Life Tech said Continue reading
Posted in BioInformatics
Tagged and-development, biology-at-the, california, kevin-harter, life, national, over-the-coming, ronnie-andrews, russia, russia-over, science, whitehead, working-at-the
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On to Management
Ewan Birney, who will become an associate director at the European Molecular Biology Laboratory's European Bioinformatics Institute in April, tells Nature that his love of science “has helped me to get through some difficult times, when I've pushed myself and others perhaps too hard.” Birney, whose career trajectory the journal profiles this week, says that for his new managerial post, “hiring excellent people, setting up situations for them to succeed in and coaching and mentoring them will be key parts.” Over at his blog, Birney expands on Nature's coverage, discussing how became interested in bioinformatics — which he says is no longer a stand-alone field. “I would argue that bioinformatics has already become an everyday part of modern biology, and that it has begun to filter through the entire system,” Birney says. Continue reading
Posted in BioInformatics
Tagged a-huge-part, big-scientific, birney, career, director, director-at-the, discussing-how, european, journal, modern-biology, nature, situations-for
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CAREERS: On to Management
Ewan Birney, who will become an associate director at the European Molecular Biology Laboratory's European Bioinformatics Institute in April, tells Nature that his love of science “has helped me to get through some difficult times, when I've pushed myself and others perhaps too hard.” Birney, whose career trajectory the journal profiles this week, says that for his new managerial post, “hiring excellent people, setting up situations for them to succeed in and coaching and mentoring them will be key parts.” Over at his blog, Birney expands on Nature's coverage, discussing how became interested in bioinformatics — which he says is no longer a stand-alone field. “I would argue that bioinformatics has already become an everyday part of modern biology, and that it has begun to filter through the entire system,” Birney says Continue reading
Posted in BioInformatics
Tagged a-huge-part, big-scientific, biology, director, director-at-the, discussing-how, european, filter-through, journal, nature, over-the-past, situations-for, some-difficult, trajectory-the
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UCSF leaders explore bioinformatics in research, patient care and education
In the world of bioinformatics, the rush is on to extract gold from a data mine. Continue reading
Posted in BioInformatics
Tagged a-data-mine-, data-mine-, extract-gold, rush, the-rush, the-world-, world
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Bioinformatics @ SFU: Dr. Cenk Sahinalp – Video
28-07-2011 13:40 Continue reading
Posted in BioInformatics
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Almac Announce Launch of Next Generation Sequencing (NGS) Data Analysis Services
CRAIGAVON, Northern Ireland–(BUSINESS WIRE)– Almac’s Diagnostics business unit today announced launch of its advanced Next Generation Sequencing (NGS) data Analysis services. Continue reading
Posted in BioInformatics
Tagged a-broad-range, a-wide-range, almac, analysis, dna, methods-as-well, north, north-carolina, pennsylvania, pharmaceutical, research, services
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Free Webinar on RCSB Protein Data Bank
OpenHelix to provide free webinar: “Introduction to RCSB PDB” on Wednesday, February 15th, at 11 a.m. PT/2:00 p.m Continue reading
Posted in BioInformatics
Tagged a-free-web, free-webinar, join-the-upcoming, pdb, protein-data, provide-free, prweb, the-provider, upcoming, use-the, webinar-on-how, webinar-will, wednesday
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UCSF School of Medicine Leaders Explore Bioinformatics
Bioinformatics was the focus of this year’s daylong UCSF School of Medicine leadership retreat on January 20. Campus leaders examined the question of how to optimally develop, organize and integrate clinical-outcome data, research data, business intelligence, and population data so that information is accessible and usable to empower research and improve medical practice. Continue reading
Posted in BioInformatics
Tagged accessible-and, and-improve, and-population, business-intelligence, examined-the-question, medical-practice-, medicine, question, research-data, retreat-on-january, school, year
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Almac Expands Bioinformatics Offering to Include Sequence Data Analysis Services
Saladax Biomedical said today that President and CEO Edward Erickson has resigned due to personal and family reasons, and that he will be replaced by Kevin Harter on an interim basis. Erickson will remain a member of the company's board of directors. Harter is a co-founder and senior VP of the Life Sciences Greenhouse, and he has served as executive chairman at Saladax Continue reading
Posted in BioInformatics
Tagged advisor-on-the, board-provides, bruce-ginsberg, department, development, four-year-term, human-services, kevin-harter, manohar-furtado, president, public-health, science
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Seminars scheduled to spread awareness about bioinformatics
BCBLab, a student-led consulting service in the bioinformatics and computational biology program, has invited big names in from the bioinformatics field for seminars this semester. Continue reading
Posted in BioInformatics
Tagged and-computational, big-names, bioinformatics, biology-program, consulting-service, field-for, from-the, from-the-bioinformatics, has-invited, semester, the-bioinformatics
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X Factor Determined Chimpanzee Development
January 31, 2012 Genetic mutations that boost an individual’s adaptability have greater chances of getting through to X chromosomes – at least in chimpanzees, according to new Danish research. One of the most important questions for evolution researchers is how a species develops and adapts during the course of time. An analysis of the genes of twelve chimpanzees has now demonstrated that the chimpanzee X chromosome plays a very special role in the animal’s development. Continue reading
Posted in BioInformatics
Tagged a-species-have, a-species-over, case, danish, environment, evolutionary, genome, research-center, researchers
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Chimp 'X factor': Extensive adaptive evolution specifically targeting the X chromosome of chimpanzees
Genetic mutations that boost an individual's adaptability have greater chances of getting through to X chromosomes — at least in chimpanzees, according to new Danish research. An analysis of the genes of 12 chimpanzees has now demonstrated that the chimpanzee X chromosome plays a very special role in the animal's evolutionary development. Continue reading
Posted in BioInformatics
Tagged a-very-special, animal, chimpanzee, chromosome-plays, danish, genes, getting-through, has-now, have-greater, the-animal, the-genes, very-special
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Genetic mutations that boost individual's adaptability have greater chances of getting through to X chromosomes
One of the most important questions for evolution researchers is how a species develops and adapts during the course of time. An analysis of the genes of twelve chimpanzees has now demonstrated that the chimpanzee X chromosome plays a very special role in the animal's development. Continue reading
Posted in BioInformatics
Tagged a-species-develops, a-very-special, aarhus, and-adapts, animal, bioinformatics, carried-out, centre, chimpanzee, during-the, for-evolution, most, research-centre, section, very-special
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Bioinformatic Tutorial: how to find human gene orthologs in early metazoans organisms – Video
30-11-2010 14:10 Here I use reciprocal blast to find the gene FAT4 from Human in the early metazaon Trichoplax. Continue reading
Posted in BioInformatics
Tagged early, find-the, find-the-gene, gene, human, the-early, trichoplax-, use-reciprocal
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Looking to Build Life Science Business, Appistry Hires New VP, Inks Deal with UM Bioinformatics Arm
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Posted in BioInformatics
Tagged access-for, and-researchers, cso, genome, molecular-dynamics, software-suite, stockholm, stockholm-university
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Diagnostic Partnering Agreements Discussed in New In-demand Report Published at MarketPublishers.com
The better half of deals entered into by the leading healthcare companies are discovery or development stage whereby the licensee accrues a right or an option right to license the licensors bioinformatics technology. Continue reading
Posted in BioInformatics
Tagged are-discovery, better-half, deals-entered, discovery-or-development, healthcare-companies, leading, license-the, license-the-licensors, licensee, licensors, the-leading, the-licensee
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Eagle lands impressive line-up for symposium
A Cambridge company helping to drive advances in the post genomics era is staging a key bioinformatics symposium in March. Eagle Genomics Limited has gathered an impressive list of speakers for the event, which is on Thursday, March 29 at Babraham Research Campus Continue reading
Posted in BioInformatics
Tagged babraham-research, campus, campus-read, drive-advances, genomics-era, has-gathered, march, the-event
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